The method of remote auto calibration measurement channels cyber-physical systems in real time using code-controlled measures is described. Additive error components as measurement as well the reference channels is adjusted by switching invert method. It is shown that the resulting measurement error virtually determined by codecontrolled measures error that could it serve as a basis for implementing remote auto calibration and operative check of metrological characteristics of measuring channels cyber-physical systems. The results of the experimental study model code-controlled measures showed good coincidence with the theoretical model.